Clinal variation along precipitation gradients in Patagonian temperate forests: unravelling demographic and selection signatures in three Nothofagus spp.

Soliani, Carolina; Azpilicueta, María Marta; Arana, María Verónica; Marchelli, Paula

doi:10.1007/s13595-019-0908-x

Annals of Forest Science

Table 3 Neutrality tests at population level on N. nervosa (N), N. obliqua (O) and N. pumilio (P) species, significance obtained under coalescent simulations (p value reported)

From: Clinal variation along precipitation gradients in Patagonian temperate forests: unravelling demographic and selection signatures in three Nothofagus spp.

G	Pop	N	D	Fs	R²	G	Pop	N	D	Fs	R²	G	Pop	N	D	Fs	R²
BAM1	N7W	22	− 0.641	− 0.176	0.086‡	PP2C-1	N7W	24	1.298	0.313	0.196	PP2C-3	N7W	22	− 1.223	− 0.554	0.093
	N2E	12	− 0.047	− 0.137	0.184		N2E	16	0.295	− 1.227	0.164		N2E	16	− 0.107	1.051	0.142
	O6W	24	0.139	0.578	0.145		O6W	24	− 0.802	− 1.195	0.091		O6W	18	− 0.184	− 1.034	0.134
	O2E	22	− 0.641	− 0.176	0.087‡		O2E	22	− 1.212	− 1.781	0.090*		O2E	20	0.159	− 3.175†	0.140
RCD1	N7W	22	0.648	2.107	0.169		P5W	12	0.872	1.171	0.081	SOS2	N7W	22	0.482	0.704	0.161
	N2E	12	− 1.114	− 0.476	0.276		P1E	18	− 0.529	− 0.011	0.115		N2E	22	0.316	1.826	0.167
	O6W	22	− 0.871	− 0.870	0.121	Ethyl	N7W	24	− 0.889	− 0.919	0.078‡		O6W	24	0.614	− 0.182	0.162
	O2E	22	− 1.162	− 0.976	0.208		N2E	22	− 1.162	− 0.957	0.208		O2E	24	0.922	0.408	0.183
	P5W	12	− 0.178	0.027	0.153		O6W	24	− 0.681	− 0.249	0.079‡		P5W	16	0.401	− 1.475	0.153
	P1E	16	0.894	0.083	0.188		O2E	20	− 0.528	− 0.464	0.138		P1E	18	− 0.213	− 2.181	0.129*
PhII	N7W	22	− 1.239	− 1.827	0.104		P5W	14	− 0.532	− 0.465	0.157	ATCHR12	N7W	20	–	–	–
	N2E	16	0.555	0.340	0.183		P1E	18	− 1.131	− 1.596*	0.116		N2E	8	0.334	0.536	0.214
	O6W	24	0.411	0.023	0.156	Lea2	N7W	20	− 1.543	− 2.120	0.086*		O6W	18	− 0.529	− 0.011	0.105‡
	O2E	20	− 0.174	1.587	0.134		N2E	12	− 0.665	− 0.311	0.1191		O2E	20	− 0.086	0.381	0.134
AdHy	N7W	18	− 1.164	− 0.794	0.229		O6W	16	− 0.403	− 1.302	0.1305
	N2E	10	0.015	0.417	0.178		O2E	20	− 1.030	− 3.29†	0.099
	O6W	18	0.819	1.365	0.178		P5W	10	− 0.178	0.090	0.153	Hsp90	P5W	16	1.283	− 0.1	0.206
	O2E	18	− 0.077	0.700	0.139		P1E	12	0.894	0.968	0.188		P1E	10	0.699	0.949	0.211
cdsp32	N7W	20	− 0.592	− 0.097	0.095	Cum	N7W	20	1.596	1.098	0.237
	N2E	16	− 0.448	0.083	0.117		N2E	18	− 0.268	− 1.11	0.132
	O6W	22	2.281*	6.45	0.242		O6W	20	0.435	0.35	0.167
	O2E	22	2.506*	2.743	0.253		O2E	18	0.488	0.796	0.183
	P5W	16	1.05	0.647	0.213
	P1E	18	1.208	− 0.44	0.217

G candidate gene, N total number of individuals per population, D Tajima’s neutrality test statistic, Fs Fu’s neutrality test statistic, R² Ramos and Rozas’ neutrality test statistic, E east, W west, BAM1 chloroplast induced Beta Amylase1, RCD1 radical induced cell death, PhII chlorophyll a/b binding protein, photosystem II light harvesting complex, AdHy adenosylhomocysteinase 2, Cdsp32 chloroplastic drought-induced stress protein, PP2C-1 protein phosphatase, Ethyl ethylene signalling protein, Lea2 late embryogenesis abundant protein, Cum 4-coumarate-CoA ligase activity, PP2C-3 protein phosphatase, SOS2 protein kinase, ATCHR12 response to environmental stress chromatin-remodelling gene
*p < 0.05; †p < 0.01; ‡p < 0.001

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ISSN: 1297-966X

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